Tentative Workshop Schedules

2009 Workshop Schedule

Day 1 (August 23rd)

Arrive in Davis. Informal dinner gathering at local restaurant.

7:30pm– Optional Dinner @ Steve’s Pizza

Day 2 (August 24th)

Location: Genome and Biomedical Science Facility Room 2202, UC Davis

Check-in/Welcome
8:00am  - 8:30am        -       Check-in, Coffee, Tea 
8:30am  - 9:00am        -       Welcome, Introduction, Overview
Development of a TILLING Population
9:00am  - 9:30am	-       Objective, Strategy, Guidelines 
9:20am  - 10:00am	-       Case Study: Wheat
10:00am - 10:30am	-       Case Study: Tomato 
Coffee Break
DNA Prep and Standardization
10:45am - 11:00am 	-	Objectives, Guidelines 
11:00am - 11:20am	-	TILLING Lab Preps 
11:20am - 11:40am	-	Wheat Preps 
11:40am - 12:00pm	-	DNA Standardization and Arraying
Lunch @ Scrubs Cafe
Target Pooling and Amplification
1:30pm -  2:00pm	-	Overview, Using CODDLE
2:30pm -  3:00pm	-	Polyploidy
Illumina Library Construction
3:00pm - 3:30pm         -       Overview
3:30pm - 5:00pm         -       Protocol
Break for the Day
Day 3 (August 25th)

Location: Genome and Biomedical Science Facility Room 2202, UC Davis

Field Tour
 9:00am - 9:15am	-	Meet outside GBSF Genome Cafe and go to field 
 9:15am - 9:45am	-	Tour Tomato TILLING Population Field
Bioinformatics, Illumina Data Processing
10:00am - 12:00pm	-       Analysis of Illumina Reads
Lunch @ Scrubs Cafe
Database – Dataflow
 1:30pm - 2:15pm	-	TILLING Pipeline 
 2:15pm - 3:00pm	-	Database, Data Management, Workflow
Mutation Report
 3:00pm - 3:30pm	-	Overview 
 3:30pm - 4:00pm	-	Deconvolution via RE/Seq 
 4:00pm - 4:45pm	-	Intro to CEL1 and Screening via CEL1
TILLING Lab Facility Tour
 4:45pm - 5:30pm         -      TILLING Lab
Optional Dinner TBA

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