Tentative Workshop Schedules

2011 Workshop Schedule

Day 1 (August 22nd)

Location: Meet at GBSF 4503 Common Room

Tour of TILLING Facilities and Tomato TILLING populations
Check-in/Welcome
8:00am - 8:15am		-	Check-in, Coffee, Tea
8:15am - 8:30am		-	Welcome & Introductions
Tour of the Fields
8:40am - 10:00am	-	Fields
10:00am - 10:30am	-	Break
Tour of the Lab
10:30am - 11:30am	-	TILLING Core Lab & Genome Center Sequencing Facilities
Lunch
Dinner
Day 2 (August 23rd)

Location: Genome and Biomedical Science Facility, Room 2202; UC Davis

Check-in/Welcome
8:00am  - 8:15am	-       Check-in, Coffee, Tea 
8:15am  - 8:45am	-       Welcome, Introduction, Overview
Development of a TILLING Population + Resource
8:45am  - 9:00am	-       Objective, Strategy, Guidelines 
9:00am  - 9:30am	-       Case Study: Wheat
9:30am - 10:00am	-       Case Study: Tomato
Coffee Break
10:30am - 11:00am 	-	DNA Standardization and Pooling Strategies
11:00am - 11:30pm	-	Illumina and Barcoding
11:30am - 12:00pm	-	Q & A
Lunch

Bioinformatics

Illumina Technology and Tilling Run Setup
1:30pm - 1:40pm         -       Intro to Bioinformatics
1:40pm - 2:00pm         -       Picking Targets
Tilling Bioinformatics Pipeline
2:00pm - 2:50pm         -       Data Analysis: Preprocessing Stage
2:50pm - 3:05pm         -       Break
3:05pm - 3:30pm         -       Data Analysis: Mutation Detection Stage using CAMBa
Mutation Report
3:30pm - 3:55pm         -       Results and Verification 
3:55pm - 4:10pm         -       Q & A
New Developments
4:10pm - 4:30pm         -       Exome Capture
4:30pm - 5:00pm         -       Resequencing at Restriction Enzyme Sites

END

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