A. Arenosa data download

cDNA contigs from A. arenosa Care-1

Meric Lieberman assembled cDNA reads generated by Illumina using using Velvet and CLC as primary assemblers and CAP3 as superassembler. The input was a cDNA library made from total flowering plants of A. arenosa Care-1. Each cDNA contig is annotated in the FASTA header with the best BLAST hit and related GO categories. The downloadable fileis about 60 Mb.

Genomic DNA contigs from A. arenosa Care-1
  • Joe’s contigs. Velvet assembly of genomic reads. Download contigs as a 54Mb zipped file
  • Victor orthologous contigs. Trimmed subset of Joe’s contigs with relation to A. thaliana orthologs. Download contigs

ABC Polyploidy site

%d bloggers like this: